From: Machine learning methods for metabolic pathway prediction
Feature | AUC | max. ACC | SN (max. ACC) | SP (max. ACC) | max. FM | PR (max. FM) | RC (max. FM) |
---|---|---|---|---|---|---|---|
fraction-reactions-with-Enzymes | 0.902 | 0.878 | 0.662 | 0.935 | 0.715 | 0.641 | 0.807 |
fraction-reactions-present | 0.899 | 0.879 | 0.618 | 0.948 | 0.699 | 0.612 | 0.815 |
fraction-reactions-present-or-Orphaned | 0.899 | 0.879 | 0.619 | 0.948 | 0.7 | 0.69 | 0.709 |
best-fraction-reactions-present-in-linear-path | 0.898 | 0.879 | 0.662 | 0.936 | 0.703 | 0.682 | 0.726 |
evidence-info-content-norm-all | 0.894 | 0.866 | 0.638 | 0.927 | 0.689 | 0.617 | 0.781 |
enzyme-info-content-norm | 0.89 | 0.855 | 0.69 | 0.899 | 0.69 | 0.584 | 0.844 |
enzyme-info-content-unnorm | 0.88 | 0.847 | 0.665 | 0.895 | 0.683 | 0.556 | 0.887 |
evidence-info-content-unnorm | 0.875 | 0.841 | 0.526 | 0.925 | 0.657 | 0.511 | 0.918 |
num-reactions-with-enzymes | 0.873 | 0.838 | 0.635 | 0.892 | 0.681 | 0.543 | 0.914 |
enzymes-per-reaction | 0.871 | 0.842 | 0.686 | 0.883 | 0.688 | 0.567 | 0.875 |