Table 1 Motifs clustering
From: Protein sequences classification by means of feature extraction with substitution matrices
| LLK | IMK | VMK | GGP | RI | RV | RF | RA | PP |
|---|---|---|---|---|---|---|---|---|---|
P m | 0.89 | 0.87 | 0.86 | 0 | 0.75 | 0.72 | 0.72 | 0.5 | 0 |
Main motif | LLK | LLK | LLK | GGP | RI | RI | RI | RV | PP |
is a set of motifs (table 1) sorted by their lengths and P
m
. The third row shows the cluster main motifs.