Consolidating metabolite identifiers to enable contextual and multi-platform metabolomics data analysis

BMC Bioinformatics

Table 2 The sources for the provided database.

Name	Source	Synchronization mode	Parser
PRIMe chemical standards	In-house database	No	simple
RIKEN MS Library	http://prime.psc.riken.jp	No	riken
MPIMP MS library	Personal communication, [21]	No	mpimp
PlantCyc compounds.dat	http://www.plantcyc.org	Yes	cycdb
KEGG Compounds/Pathways	http://www.genome.jp	Yes	kegg
ChEBI	http://www.ebi.ac.uk/chebi	Yes	chebi

The sources used to build the provided database. Each source contains one or more different identifier types. Synchronization mode imports only additional data to already existing metabolite groups in the database.

ISSN: 1471-2105