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Table 2 Enriched GO terms of Ste12-binding sites in yeast.

From: ChIPpeakAnno: a Bioconductor package to annotate ChIP-seq and ChIP-chip data

GO ID

GO Term

GO Definition

Category

FDR

GO:0055114

oxidation reduction

The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons.

BP

0.018

GO:0008270

zinc ion binding

Interacting selectively and non-covalently with zinc (Zn) ions.

MF

0.047

GO:0043167

ion binding

Interacting selectively and non-covalently with ions, charged atoms or groups of atoms.

MF

0.046

GO:0043169

cation binding

Interacting selectively and non-covalently with cations, charged atoms or groups of atoms with a net positive charge.

MF

0.046

GO:0043565

sequence-specific DNA binding

Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding.

MF

0.046

GO:0046914

transition metal ion binding

Interacting selectively and non-covalently with a transition metal ions; a transition metal is an element whose atom has an incomplete d-subshell of extranuclear electrons, or which gives rise to a cation or cations with an incomplete d-subshell. Transition metals often have more than one valency state. Biologically relevant transition metals include vanadium, manganese, iron, copper, cobalt, nickel, molybdenum and silver.

MF

0.046

  1. The enriched GO terms were obtained from the putative Ste12-binding regions merged from three biological replicates identified in yeast [31]. The parameter used to generate the list is maxP = 0.05, multipAdj = TRUE, minGOterm = 5 and multiAdjMethod ="BH".