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Table 2 Analysis of C. remanei fem-3 and tra-2 genes

From: JCoDA: a tool for detecting evolutionary selection

Gene

Pathway

dN/dS

M7-vs-M8

Proportion of sites with dN/dS>1

fem-3

B

0.23

10.42

2.3

tra-2

B

0.37

1.23

0.7

  1. The fem-3 and tra-2 intraspecies data from Haag and Ackerman (2005) were analyzed using both pairwise and site-based methods. Using M7 -vs- M8 models LRT rejects the null for fem-3 (Df = 2, χ2l = 9.2103, P < 0.01, bold) but not for tra-2. B = involved in somatic and germ line sex determination. dN/dS = average pairwise. Proportion of sites with dN/dS>1 = ratio of selected sites with a probability higher than 0.5 of dN/dS>1 to total sites.
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BMC Bioinformatics

ISSN: 1471-2105

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