From: Predicting changes in protein thermostability brought about by single- or multi-site mutations
Feature | Programa | Feature | Program |
---|---|---|---|
Total energy | FoldX | Stereochemical improper dihedral potential | Modeller 9.7 |
Backbone H-bond | FoldX | Frequency_[0,2.1) b | Modeller 9.7 |
Sidechain H-bond | FoldX | Frequency_[2.1,2.2) | Modeller 9.7 |
Van der Waals forces | FoldX | Frequency_[2.2,2.3) | Modeller 9.7 |
Electrostatic attractions | FoldX | Frequency_[2.3,2.4) | Modeller 9.7 |
Solvation polar | FoldX | Frequency_[2.4,2.5) | Modeller 9.7 |
Solvation hydrophobic | FoldX | Frequency_[2.5,2.6) | Modeller 9.7 |
Van der Waals clashes | FoldX | Frequency_[2.6,2.7) | Modeller 9.7 |
Entropy side chain | FoldX | Frequency_[2.7,2.8) | Modeller 9.7 |
Entropy main chain | FoldX | Frequency_[2.8,2.9) | Modeller 9.7 |
Torsional clash | FoldX | Frequency_[2.9,3.0) | Modeller 9.7 |
Backbone clash | FoldX | Frequency_[3.0,3.1) | Modeller 9.7 |
Helix dipole | FoldX | Frequency_[3.1,3.2) | Modeller 9.7 |
Current energy | Modeller 9.7 | Frequency_[3.2,3.3) | Modeller 9.7 |
Bond energy | Modeller 9.7 |