From: PeakAnalyzer: Genome-wide annotation of chromatin binding and modification loci
Program | Subpeaks | Length | |||||
---|---|---|---|---|---|---|---|
 | unfiltered/filtered | min | Q1 | median | mean | Q3 | max |
FindPeaks | 414727/14177 | 4 | 41 | 51 | 60 | 65 | 607 |
Adjusted output | 118724/45588 | 37 | 460 | 560 | 590 | 692 | 2490 |
SWEMBL | 186472/13056 | 3 | 41 | 52 | 59 | 68 | 351 |
Adjusted output | 88908/37095 | 2 | 145 | 185 | 195 | 233 | 1237 |
MACS | 61283/8504 | 4 | 42 | 53 | 60 | 69 | 351 |
Adjusted output | 16989/10928 | 39 | 220 | 289 | 293 | 359 | 1329 |
ChIPSeqMini | 22704/7024 | 4 | 41 | 52 | 58 | 69 | 351 |
SISSRs | 6854/2730 | 1 | 36 | 45 | 47 | 55 | 201 |
USeq | 5100/2851 | 4 | 39 | 54 | 59 | 73 | 350 |