Table 2 Selected probe information.
Targeted Gene | Probe name | Sequence | Number of unique DNA sequences used for the probe design | Number of specific probes | Positions on the reference gene sequence |
|---|---|---|---|---|---|
phnA1a | phnA1a_MD_A | GTITGYAAYTAYCAYGGITGGGT | 5 | 256 | 294 - 316 |
phnA1a_MD_B | CAYGARATHGARGTITGGACITA | 4 | 384 | 957 - 979 | |
phnA2a | phnA2a_MD_A | GARGAYATHCAYTAYTGGATGCC | 2 | 48 | 123 - 145 |
phnA2a_MD_B | GGICARGTITGGATGGARGAYCC | 3 | 128 | 261 - 284 | |
ahdA1c | ahdA1c_MD_A | GARTGYGTITAYCAYCARTGGGC | 3 | 128 | 318 - 340 |
ahdA1c_MD_B | GAYGCIGCIGAYAARCARGCITA | 2 | 1024 | 771 - 793 | |
ahdA2c | ahdA2c_MD_A | GAYGAYMGIYTIGARGARTGGCC | 3 | 1024 | 081 - 103 |
ahdA2c_MD_B | ATHGAYACIATGATGGTIMGICC | 3 | 768 | 459 - 481 | |
bphB | bphB_MD_A | AAYGTIGGIATHTGGGAYTWYAT | 3 | 768 | 261 - 283 |
bphB_MD_B | AAYBTIAARGGITAYTTYTTYGG | 3 | 384 | 348 - 370 | |
bphC | bphC_MD_A | CCITAYTTYATGCAYTGYAAYGA | 5 | 128 | 558 - 580 |
bphC_MD_B | TGGYTITGGGARTTYGGITGGGG | 4 | 128 | 777 - 799 | |
bphA3 | bphA3_MD_A | ATHATHGARTGYCCITTYCAYGG | 2 | 576 | 180 - 202 |
bphA3_MD_B | ATHGAIGAYGGITGGGTITGYAT | 3 | 768 | 279 - 302 | |
ahdA4 | ahdA4_MD_A | GCIAAYGTICCIGAYAAYTTYTT | 2 | 1024 | 159 - 181 |
ahdA4_MD_B | CARGARACITAYCARAAYGCIGC | 2 | 512 | 867 - 889 |