Asymmetric microarray data produces gene lists highly predictive of research literature on multiple cancer types

BMC Bioinformatics

Table 1 Overview of datasets used and distribution of microarray samples

Analysis	Tissue	Accession #	Normal	Cancer	Platform
IV1/IV2/SAM1/SAM2	Colon	E-MTAB-57	22	25	A
		GSE4107	10	12	P2
		GSE4183	8	15	P2
	Kidney	E-TABM-282	11	16	P2
		GSE11024†	12	60	P2
		GSE11151	3	57	P2
		GSE14762†	12	10	P2
		GSE15641	23	57	A
		GSE6344	10	10	A
		GSE7023	12	35	P2
	Liver	GSE14323	19	47	A/A2
		GSE6764	10	35	P2
	Lung	E-MEXP-231	9	49	A
		GSE10072	49	58	A
		GSE7670	27	27	A
	Pancreas	E-MEXP-1121†	6	17	A
		E-MEXP-950	11	14	A
		GSE15471	39	39	P2
		GSE16515	15	36	P2
		Total:	294	619
SAM2	Colon	E-MEXP-1224	0	55	A
		E-MEXP-383	0	36	A
		E-TABM-176	55	0	P2
		GSE12945	0	36	A
		GSE17538	0	232	P2
	Kidney	GSE10320	0	144	A
		GSE11904	0	21	A2
	Liver	E-TABM-292	0	32	A
		E-TABM-36	0	57	A
		GSE9843	0	69	P2
	Lung	GSE10445	0	72	P2
		GSE12667	0	75	P2
		Total:	55	829
IV2	Colon	GSE6988	28	52	cDNA
	Kidney	GSE3	81	90	cDNA
	Lung	GSE7367	24	24	cDNA
		GSE2088	30	57	cDNA
		GSE8596	6	69	cDNA
		Total:	169	292

ISSN: 1471-2105