From: Misty Mountain clustering: application to fast unsupervised flow cytometry gating
Data set | Manually gated 2D barcoding& | Simulated 5D Gaussians | Simulated 2D non-convex | 3D rituximab | 4D GvHD | Manually gated 4D OP9 | ||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Misty Mountain | accuracy | sens | (%) | 100 | 100 | 100 | - | - | 100 | |||
spec | (%) | 100 | 100 | 100 | - | - | 100 | |||||
CPU | (sec) | 10 | 196 | 6 | 0.3 | 0.8 | 3.6 | |||||
FLAME | accuracy | sens | (%) | 20a | 60b | - | 0d* | 100d | - | - | - | |
spec | (%) | 33a | 50b | - | 0d* | 100d | - | - | - | |||
CPU | (sec) | 5.104 | >3.105 | 1.104 | 10 | 360 | 1.4 · 104 | |||||
flowClust | accuracy | sens | (%) | 45a* | 60b* | 100c | 0c* | 100d | - | - | 60d* | 60* |
spec | (%) | 60a* | 55b* | 100c | 0c* | 100d | - | - | 75d* | 38* | ||
CPU | (sec) | 5.104 | 4.104 | 7200 | 43 | 480 | 3660 | |||||
flowMerge | accuracy | sens | (%) | 25 | 100 | 0 | - | - | 80 | |||
spec | (%) | 45 | 100 | 0 | - | - | 57 | |||||
CPU | (sec) | 1.3 · 105 | 1.27 · 105 | 7200 | 124 | 1020 | 8400 | |||||
flowJo | accuracy | sens | (%) | 45 | - | - | - | - | - | |||
spec | (%) | 47 | - | - | - | - | - | |||||
CPU | (sec) | 1-10 | - | - | 1-10 | 1-10 | - |