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Table 2 Four Column Map File

From: CCRaVAT and QuTie - enabling analysis of rare variants in large-scale case control and quantitative trait association studies

CHR

MARKER

GEN POS

BP POS

1

SNP1

0

1111

1

SNP2

1

2111

1

SNP3

2

3111

1

SNP4

3

4111

  1. 4 column map file that contains the chromosome, marker name, genetic position, and base pair position. The four column format is the same used by the genetics software package PLINK. The header row is for display purposes only and should not appear in the actual file.
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BMC Bioinformatics

ISSN: 1471-2105

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