Table 7 Comparison of independent test between GlycoRBF and other methods.
Methods | GlycoRBF | GPP | NetOglyc3.1 | CKSAAP | |
|---|---|---|---|---|---|
O-linked glycosylation sites on TM proteins | Sensitivity | 50.0% | 57.1% | 21.4% | 28.6% |
| Â | Specificity | 70.2% | 38.4% | 82.1% | 74.2% |
| Â | Accuracy | 70.0% | 38.7% | 81.4% | 73.6% |
| Â | Balanced Accuracy | 60.1% | 47.8% | 51.7% | 51.4% |
| Â | MCC | 0.05 | -0.01 | 0.01 | 0.01 |
O-linked glycosylation sites on non-TM proteins | Sensitivity | 61.4% | 54.5% | 47.7% | 20.5% |
| Â | Specificity | 80.4% | 44.1% | 82.0% | 78.2% |
| Â | Accuracy | 79.2% | 44.8% | 79.9% | 74.6% |
| Â | Balanced Accuracy | 70.9% | 49.3% | 64.9% | 49.4% |
| Â | MCC | 0.24 | -0.01 | 0.18 | -0.01 |