Table 1 Circadian pathways and associated cluster numbers.
From: Circadian signatures in rat liver: from gene expression to pathways
Pathway name | Cluster ID |
|---|---|
ASCORBATE AND ALDARATE METABOLISM | 1 |
BUTANOATE METABOLISM | 1 |
PURINE METABOLISM | 1 |
LIMONENE AND PINENE DEGRADATION | 1 |
DNA POLYMERASE | 1 |
ATP SYNTHESIS | 1 |
DNA REPLICATION REACTOME | 1 |
LYSINE DEGRADATION | 1 |
HISTIDINE METABOLISM | 1 |
PHENYLALANINE METABOLISM | 1 |
3 CHLOROACRYLIC ACID DEGRADATION | 1 |
G1 TO S CELL CYCLE REACTOME | 2 |
FATTY ACID METABOLISM | 2 |
BILE ACID BIOSYNTHESIS | 2 |
UREA CYCLE AND METABOLISM OF AMINO GROUPS | 2 |
VALINE LEUCINE AND ISOLEUCINE DEGRADATION | 2 |
TRYPTOPHAN METABOLISM | 2 |
P53 SIGNALING PATHWAY | 2 |
CELL CYCLE KEGG | 2 |
G2 PATHWAY | 2 |
ARGININE AND PROLINE METABOLISM | 2 |
RNA POLYMERASE | 2 |
IFNA PATHWAY | 2 |
ST TYPE I INTERFERON PATHWAY | 2 |
POLYUNSATURATED FATTY ACID BIOSYNTHESIS | 3 |
CELL COMMUNICATION | 3 |
ANTIGEN PROCESSING AND PRESENTATION | 3 |
MRP PATHWAY | 3 |
FRUCTOSE AND MANNOSE METABOLISM | 3 |
TYROSINE METABOLISM | 3 |
ETC PATHWAY | 4 |
TYROSINE METABOLISM | 4 |
MALATEX PATHWAY | 4 |
PROTEASOME PATHWAY | 4 |
ALANINE AND ASPARTATE METABOLISM | 4 |
GLYCOLYSIS AND GLUCONEOGENESIS | 4 |
SA CASPASE CASCADE | 4 |
CHOLESTEROL BIOSYNTHESIS | 5 |
GLYCEROPHOSPHOLIPID METABOLISM | 5 |
TERPENOID BIOSYNTHESIS | 5 |
RNA TRANSCRIPTION REACTOME | 5 |
BIOSYNTHESIS OF STEROIDS | 5 |
CIRCADIAN EXERCISE | 5 |
CYANOAMINO ACID METABOLISM | 5 |
FEEDER PATHWAY | 5 |
GLYCEROLIPID METABOLISM | 5 |
GLYCINE SERINE AND THREONINE METABOLISM | 5 |
METHIONINE METABOLISM | 5 |
LYSINE BIOSYNTHESIS | 5 |
NUCLEOTIDE SUGARS METABOLISM | 5 |
ETHER LIPID METABOLISM | 5 |
SPHINGOLIPID METABOLISM | 5 |
ONE CARBON POOL BY FOLATE | 5 |
BASAL TRANSCRIPTION FACTORS | 5 |
CIRCADIAN RHYTHM | 5 |
LYSINE BIOSYNTHESIS | 5 |
LYSINE DEGRADATION | 5 |
MEF2 D PATHWAY | 5 |
METHANE METABOLISM | 5 |
METHIONINE METABOLISM | 5 |
METHIONINE PATHWAY | 5 |
ONE CARBON POOL BY FOLATE | 5 |
SA G1 AND S PHASES | 5 |
SELENOAMINO ACID METABOLISM | 5 |
TID PATHWAY | 5 |
TOLL PATHWAY | 5 |
APOPTOSIS | 5 |
APOPTOSIS GENMAPP | 5 |
CARM ER PATHWAY | 5 |
EPONFKB PATHWAY | 5 |
FXR PATHWAY | 5 |
G1 PATHWAY | 5 |
GSK3 PATHWAY | 5 |
LEPTIN PATHWAY | 5 |
P53 PATHWAY | 5 |
RACCYCD PATHWAY | 5 |
SA REG CASCADE OF CYCLIN EXPR | 5 |
TALL1 PATHWAY | 5 |