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Table 3 Power comparison for V-Bay, the lasso, and single-marker GWA analysis from simulated data with 100,000 markers.

From: A variational Bayes algorithm for fast and accurate multiple locus genome-wide association analysis

sample

loci

V-Bay

the lasso

single-marker

200

4

90.0%

87.5%

47.5%

200

32

14.1%

4.69%

7.19%

1000

4

97.5%

77.5%

60.0%

1000

32

80.6%

65.0%

33.1%

  1. Phenotypes were simulated with a fixed total heritability of 0.9. The false discovery rate was controlled to 5% for all three analyses.
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BMC Bioinformatics

ISSN: 1471-2105

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