From: SeqWare Query Engine: storing and searching sequence data in the cloud
Dataset | Technology | SNVs & Indels | SV | Translocations | Reference |
---|---|---|---|---|---|
European-Venter | Sanger | Y | Y | N | Levy et al. 2007 [3] |
European-Watson | 454 | Y | Y | N | Wheeler et al. 2008 [4] |
European- Quake | Helicos | Y | Y | N | Pushkarev et al. 2009 [5] |
Asian | Illumina | Y | Y | N | Wang et al. 2008 [6] |
Yoruban 18507 | Illumina | Y | Y | N | Bentley et al. 2008 [7] |
Yoruban 18507 | SOLiD | Y | Y | N | McKernan et al. 2009 [8] |
Korean | Illumina | Y | Y | N | Ahn et al. 2009 [9] |
Korean-AKI | Illumina | Y | Y | N | Kim et al. 2009 [10] |
3 human genomes | Complete Genomics | Y | Y | N | Drmanac et al. 2009 [11] |
AML T/N | Illumina | Y | Y | N | Ley et al. 2008 [12] |
AML genome | Illumina | Y | Y | N | Mardis et al. 2009 [13] |
Melanoma | Illumina | Y | Y | N | Pleasance et al. 2010 [15] |
Lung cancer | SOLiD | Y | Y | N | Pleasance et al. 2010 [14] |
U87MG | SOLiD | Y | Y | Y | Clark et al. 2010 [16] |