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Table 2 NCI/Nature pathways with highest differential behavior in GBM tumor samples.

From: The PathOlogist: an automated tool for pathway-centric analysis

Top 15 NCI/Nature Pathways - Activity

p-value

signaling events mediated by hdac class i(nci/nature)

8.56E-05

cellular roles of anthrax toxin(nci/nature)

8.70E-05

hiv-1 nef: negative effector of fas and tnf-alpha(nci/nature)

8.70E-05

nephrin/neph1 signaling in the kidney podocyte(nci/nature)

8.84E-05

class ib pi3k non-lipid kinase events(nci/nature)

8.98E-05

p38 signaling mediated by mapkap kinases(nci/nature)

9.42E-05

hypoxic and oxygen homeostasis regulation of hif-1-alpha(nci/nature)

1.09E-04

hif-1-alpha transcription factor network(nci/nature)

1.16E-04

amb2 integrin signaling(nci/nature)

1.18E-04

signaling events mediated by prl(nci/nature)

1.36E-04

vegfr1 specific signals(nci/nature)

1.36E-04

caspase cascade in apoptosis(nci/nature)

1.39E-04

s1p3 pathway(nci/nature)

1.83E-04

bard1 signaling events(nci/nature)

2.02E-04

lpa receptor mediated events(nci/nature)

2.22E-04

Top 15 NCI/Nature Pathways - Consistency

p-value

nephrin/neph1 signaling in the kidney podocyte(nci/nature)

8.56E-05

hiv-1 nef: negative effector of fas and tnf-alpha(nci/nature)

8.56E-05

rac1 signaling pathway(nci/nature)

8.56E-05

class ib pi3k non-lipid kinase events(nci/nature)

8.98E-05

cdc42 signaling events(nci/nature)

9.73E-05

bard1 signaling events(nci/nature)

1.05E-04

hypoxic and oxygen homeostasis regulation of hif-1-alpha(nci/nature)

1.12E-04

signaling events mediated by focal adhesion kinase(nci/nature)

1.14E-04

regulation of p38-alpha and p38-beta(nci/nature)

1.40E-04

alpha-synuclein signaling(nci/nature)

1.83E-04

signaling events mediated by hdac class i(nci/nature)

1.97E-04

pdgfr-beta signaling pathway(nci/nature)

2.04E-04

fas (cd95) signaling pathway(nci/nature)

2.39E-04

igf1 pathway(nci/nature)

2.77E-04

noncanonical wnt signaling pathway(nci/nature)

3.09E-04