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Table 7 dRMSD values between points A, B, C, D, in Figure 8.

From: Conformational and functional analysis of molecular dynamics trajectories by Self-Organising Maps

 

dRMSD (Ã…)

 

ABD

ACD

ABC

ABCD

Cluster 1

1.7

0.9

1.4

1.4

Cluster 2

1.0

1.5

1.6

1.4

Cluster 3

2.2

2.3

2.7

2.4

Cluster 4

2.0

2.1

1.6

2.2

Cluster 5

3.8

2.9

2.4

3.5

  1. The dRMSD are calculated as the average distance of the selected points in the conformational ensemble of each cluster and the same distance in the WT SH3 structure.
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BMC Bioinformatics

ISSN: 1471-2105

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