From: Qxpak.5: Old mixed model solutions for new genomics problems
Test | Meaning | P-value |
---|---|---|
1 vs. only fixed effects | QTL additive effect | 6 Ă— 10-7 |
2 vs. 0 | QTL additive effect conditional on infinitesimal effect | 3 Ă— 10-7 |
3 vs. 0 | QTL additive and dominance effects conditional on infinitesimal effect | 2 Ă— 10-6 |
4 vs. 0 | QTL additive effect nested within sex conditional on infinitesimal effect | 3 Ă— 10-8 |
5 vs. 0 | Raw association signal conditional on infinitesimal effect | 5 Ă— 10-7 |
6 vs. 4 | Association (SNP) signal conditional on linkage (QTL) signal | 0.43 |
6 vs. 5 | Linkage signal conditional on SNP signal | 7 Ă— 10-3 |