Table 1 Examples of Object Properties and Classes for the CE Ontology
From: Semantic inference using chemogenomics data for drug discovery
Properties | Classes | Explanation |
|---|---|---|
isSimilarTo | Chemical Compound, Chemical Compound | Chemical Compound is similar to Chemical Compound |
isActiveIn | Chemical Compound, PubChem BioAssay | Chemical is tested active in the bioassay |
isContainedIn | Chemical Compound, Journal Article | Chemical is contained in the article |
hasGenes | Pubchem BioAssay/Drug/Journal Article, Gene | Bioassay/Drug/Article has found the gene term related the corresponding text; Bioassay/Drug/Article has a reference to the gene |
hasDisease | Pubchem BioAssay/Drug/Journal Article, Disease | Bioassay/Drug/Article has found the disease term related the corresponding text; Bioassay/Drug/Article has a reference to the disease |
isAssociatedWith | Gene, Disease | Gene and disease is associated |
hasSimilarity | Chemical Compound, Similarity | Chemical has similarity value based on Tanimoto coefficient. |