From: Methodology and software to detect viral integration site hot-spots
Data set | # VIS | Chr | Location (Mb) | # VIS (%) | Size (Mb) | % Density |
---|---|---|---|---|---|---|
H-LV-acute | 922 | Chr 11 | 65.020-65.721 | 12 (1.30%) | 0.7 | 1.86 |
H-LV-acute | 922 | Chr 16 | 0.425-1.929 | 7 (0.76%) | 1.5 | 0.51 |
H-LV-acute | 922 | Chr 17 | 77.185-78.117 | 8 (0.87%) | 0.93 | 0.93 |
Median | - | - | - | 8 (0.87%) | 0.93 | 0.93 |
H-LV-XALD | 2401 | Chr 6 | 31.967-33.000 | 35 (1.46%) | 1.03 | 1.41 |
H-LV-XALD | 2401 | Chr 11 | 64.005-66.969 | 61 (2.54%) | 2.96 | 0.86 |
H-LV-XALD | 2401 | Chr 12 | 6.085-6.993 | 16 (0.67%) | 0.91 | 0.73 |
H-LV-XALD | 2401 | Chr 17 | 2.000-2.522 | 17 (0.71%) | 0.52 | 1.36 |
H-LV-XALD | 2401 | Chr 17 | 73.098-74.252 | 20 (0.83%) | 1.15 | 0.72 |
Median | - | - | - | 20 (0.83%) | 1.03 | 0.86 |
H-Patient1 | 1627 | Chr 6 | 31.967-33.000 | 25 (1.54%) | 1.03 | 1.49 |
H-Patient1 | 1627 | Chr 11 | 64.019-66.969 | 47 (2.89%) | 2.95 | 0.98 |
H-Patient1 | 1627 | Chr 12 | 6.085-6.993 | 14 (0.86%) | 0.91 | 0.95 |
H-Patient1 | 1627 | Chr 17 | 73.098-74.252 | 15 (0.92%) | 1.15 | 0.8 |
H-Patient1 | 1627 | Chr 17 | 77.093-77.863 | 13 (0.8%) | 0.77 | 1.04 |
H-Patient1 | 1627 | Chr 19 | 53.882-54.813 | 12 (0.74%) | 0.93 | 0.79 |
Median | - | - | - | 14.5 (0.89%) | 0.98 | 0.965 |
H-Patient2 | 774 | Chr 1 | 2.038-2.954 | 6 (0.78%) | 0.92 | 0.85 |
H-Patient2 | 774 | Chr 3 | 47.057-47.926 | 6 (0.78%) | 0.87 | 0.89 |
H-Patient2 | 774 | Chr 6 | 31.867-32.976 | 11 (1.42%) | 1.11 | 1.28 |
H-Patient2 | 774 | Chr 16 | 0.592-1.838 | 7 (0.9%) | 1.25 | 0.73 |
H-Patient2 | 774 | Chr 17 | 2.000-2.452 | 7 (0.9%) | 0.45 | 2 |
H-Patient2 | 774 | Chr 17 | 76.215-76.864 | 6 (0.78%) | 0.65 | 1.19 |
Median | - | - | - | 6.5 (0.84%) | 0.89 | 1.04 |