Figure 2From: Phamerator: a bioinformatic tool for comparative bacteriophage genomicsEffects of CLUSTALW and BLASTP thresholds on pham assembly. A. Changes in the total number of phams, number of orphams, and maximum pham size as a function of CLUSTALW threshold (percent identity). B. Changes in the percent of total phams that are orphams and mean pham size as a function of CLUSTALW threshold (percent identity). C. Changes in the total number of phams, number of orphams, and maximum pham size as a function of BLASTP threshold (E-value), superimposed over a CLUSTALW cutoff value of 32.5% identity. D. Change in the mean pham size as a function of BLASTP threshold (E-value), superimposed over a CLUSTALW cutoff value of 32.5% identity.Back to article page