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Figure 9 | BMC Bioinformatics

Figure 9

From: Techniques for analysing pattern formation in populations of stem cells and their progeny

Figure 9

Calculating PCFs. Schematic diagram to illustrate the method used to calculate PCFs. For each distance interval (r k , r k +1] and each cell with centre x m , we count the number of (other) cells in r k <rr k +1 where r is distance from x m . The PCF, g(r), on r k <rr k+ 1 is the mean number of cells in these annular regions normalised by π ( r k + 1 2 - r k 2 ) ρ , which is the number of other cells which would be expected to be found in the annular region were the cells uniformly distributed (see equations (10)-(11)). For the cross PCFs g XY (r), we restrict x m to be of type X and only count cells of type Y; g S (r) is calculated from g RR (r) and g GG (r) by (12).

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