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Table 2 AMD dataset analysis comparison Leptospirillum sp. group II

From: RAIphy: Phylogenetic classification of metagenomics samples using iterative refinement of relative abundance index profiles

PHYLUM

Phymm

MEGAN

PhymmBL

RAIphy

Proteobacteria

80.2%

60.4%

79.6%

87.6%

Chlorobi

6%

2.5%

5.7%

4.9%

Firmicutes

2.3%

10.2%

2.7%

2.1%

Actinobacteria

<1%

1%

2%

1.3%

Other phyla

2.6%

12%

10%

4.1%

  1. Phylum-level classification of the genome fragments belonging to Leptospirillum sp.group II according to the sequence alignments with the reads and draft of the genome for the taxonomic classification programs Phymm, MEGAN, PhymmBL, and RAIphy.
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BMC Bioinformatics

ISSN: 1471-2105

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