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Table 3 Number of distinct human interactions in both non-canonical (RIGIDs) and canonical versions (cRIGIDs).

From: iRefR: an R package to manipulate the iRefIndex consolidated protein interaction database

dataset

RIGIDs

cRIGIDs

Complete Human Dataset

138570

125898

Human-Human Interactions

119764

107257

Binary Subset

132889

120425

Binary Human-Human Subset

114091

101792

Complex Subset

5232

5027

Complex Human-Human Subset

5226

5021

Polymer Subset

449

446

Polymer Human-Human Subset

447

444

  1. iRefIndex has 138570 distinct human interactions (125898 after canonicalization), 119764 of which are human-human protein interactions (107257 after canonicalization). The majority of these data are binary records.
  2. RIGID: number of distinct interactions (groups of distinct ROGIDs).
  3. cRIGID: number of distinct interactions (groups of distinct canonical ROGIDs)
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BMC Bioinformatics

ISSN: 1471-2105

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