From: iRefR: an R package to manipulate the iRefIndex consolidated protein interaction database
a. C. elegans | Â | Â | Â | Â | Â | Â | Â |
---|---|---|---|---|---|---|---|
Dataset | n | I | X | C | dav | dvar | dmax |
All canon spoke | 5368 | 11848 | 11720 | 43 | 4.45 * | 159.29 | 514 |
All non-canon spoke | 5835 | 13774 | 13644 | 44 | 4.76 | 171.17 | 514 |
All canon matrix | 5368 | 11848 | 11720 | 43 | 5.42* | 210.28 | 514 |
LT canon spoke | 570 | 544 | 498 | 41 | 2.59 | 26.13 | 92 |
b. D. melanogaster | Â | Â | Â | Â | Â | Â | Â |
Dataset | n | I | X | C | dav | dvar | dmax |
All canon spoke | 9454 | 36576 | 36199 | 178 | 7.73 | 160.69 | 220 |
All non-canon spoke | 11099 | 46727 | 46349 | 178 | 8.41 | 191.62 | 260 |
All canon matrix | 9454 | 36576 | 36199 | 178 | 7.91 | 166.84 | 220 |
LT canon spoke | 1496 | 3543 | 3371 | 153 | 4.91 | 53.90 | 101 |
c. E. coli | Â | Â | Â | Â | Â | Â | Â |
Dataset | n | I | X | C | dav | dvar | dmax |
All canon spoke | 919 | 1065 | 924 | 109 | 2.10 | 0.98 | 13 |
All non-canon spoke | 919 | 1065 | 924 | 109 | 2.10 | 0.98 | 13 |
All canon matrix | 919 | 1065 | 924 | 109 | 2.14 | 1.17 | 13 |
LT canon spoke | 786 | 826 | 783 | 17 | 2.08 | 0.83 | 11 |
d. H. sapiens | Â | Â | Â | Â | Â | Â | Â |
Dataset | n | I | X | C | dav | dvar | dmax |
All canon spoke | 16320 | 107257 | 101792 | 5021 | 14.26 | 837.92 | 789 |
All non-canon spoke | 18631 | 119764 | 114091 | 5226 | 13.92 | 816.91 | 789 |
All canon matrix | 16320 | 107257 | 101792 | 5021 | 42.50 | 8637.40 | 1145 |
LT canon spoke | 10860 | 44689 | 40655 | 3677 | 8.84 | 317.01 | 445 |
e. M. musculus | Â | Â | Â | Â | Â | Â | Â |
Dataset | n | I | X | C | dav | dvar | dmax |
All canon spoke | 6280 | 9872 | 8501 | 1268 | 4.13* | 144.41 | 608 |
All non-canon spoke | 6560 | 10143 | 8741 | 1299 | 4.05 | 139.00 | 608 |
All canon matrix | 6280 | 9872 | 8501 | 1268 | 83.50* | 39515.35 | 1010 |
LT canon spoke | 4811 | 5732 | 4777 | 865 | 3.36 | 112.71 | 608 |
f. R. norvegicus | Â | Â | Â | Â | Â | Â | Â |
Dataset | n | I | X | C | dav | dvar | dmax |
All canon spoke | 2517 | 3212 | 2671 | 477 | 3.50 | 241.61 | 641 |
All non-canon spoke | 2588 | 3304 | 2758 | 481 | 3.49 | 236.32 | 641 |
All canon matrix | 2517 | 3212 | 2671 | 477 | 171.95 | 76175.86 | 858 |
LT canon spoke | 1786 | 2263 | 1811 | 402 | 3.07 | 31.37 | 117 |
g. S. cerevisiae | Â | Â | Â | Â | Â | Â | Â |
Dataset | n | I | X | C | dav | dvar | dmax |
All canon spoke | 6296 | 185384 | 178035 | 6875 | 65.43 | 8208.29 | 1322 |
All non-canon spoke | 6299 | 185398 | 178045 | 6879 | 65.40 | 8206.43 | 1322 |
All canon matrix | 6296 | 185384 | 178035 | 6875 | 157.76 | 51736.61 | 2292 |
LT canon spoke | 4181 | 21981 | 21279 | 543 | 10.57 | 202.12 | 307 |