Table 2 Comparison of performances of different methods on hybrid models
From: SNPInterForest: A new method for detecting epistatic interactions
| Â | SNPInterForest | BOOST | SNPHarvester | |||
|---|---|---|---|---|---|---|
| Â | # of true positives (N total = 250) | # of false positives | # of true positives (N total = 250) | # of false positives | # of true positives (N total = 250) | # of false positives |
h2 = 0.4, MAF = 0.2 | 250 | 0 | 250 | 10 | 119 | 0 |
h2 = 0.4, MAF = 0.4 | 250 | 0 | 250 | 3 | 115 | 0 |
h2 = 0.3, MAF = 0.2 | 250 | 0 | 250 | 7 | 103 | 0 |
h2 = 0.3, MAF = 0.4 | 250 | 0 | 250 | 8 | 108 | 0 |
h2 = 0.2, MAF = 0.2 | 249 | 2 | 250 | 9 | 111 | 1 |
h2 = 0.2, MAF = 0.4 | 248 | 1 | 250 | 2 | 102 | 0 |