Figure 3From: Accurate statistics for local sequence alignment with position-dependent scoring by rare-event samplingThe layout of the HMM for transmembrane proteins. The layout of the HMM for transmembrane proteins according to Sonnhammer et.al. [25]. Each box corresponds to a group of states. For example the helix-core block consists of 25 internal states. Line type of boxes represent different emission probabilities. For more details we refer the reader to the original publication.Back to article page