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Table 1 Summary of the genotyping algorithms compared.

From: Comparing genotyping algorithms for Illumina's Infinium whole-genome SNP BeadChips

Method

Major Features

 

Normalization

Model

System

GenCall

W

B

Win

Illuminus

W

B

Lin

GenoSNP

W

W

Lin/Win

CRLMM

W+B

B

Win/Lin/OSX

  1. Key: W - within sample method; B - between sample method; Win - Windows operating system; Lin - Linux operating system; OSX - Macintosh operating system
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BMC Bioinformatics

ISSN: 1471-2105

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