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Table 1 Filtering Erroneous Heterozygous Sites

From: Strobe sequence design for haplotype assembly

Error Rate, Coverage

% of False Positives

% of False Negatives

5%,10×

0

0.467

10%,10×

0

0.197

15%,10×

0

0.142

5%,15×

0

0.329

10%,15×

0

0.149

15%,15×

0

0.114

  1. This table shows false positive rates (% of actual SNPs filtered) and false negative rates (% of erroneous sites not filtered) when sites are filtered using the likelihood ratio with a cutoff at -1.
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BMC Bioinformatics

ISSN: 1471-2105

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