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Table 2 The changed epitopes and mutations of 11 virus-pairs under 4 models

From: Changed epitopes drive the antigenic drift for influenza A (H3N2) viruses

Virus A

Virus B

Type1

Changed epitopes

HD2

Mutation positions

Model one

Model two

Model three

Model four

Epitope A

Epitope B

Epitope C

Epitope D

Epitope E

    

A/PortChalmers/1/73

A/Singapore/4/75

S

ABCDE

B

B

B

9

126 3

160, 189

278

242

83

A/Nanchang/933/95

A/NewYork/43/96

S

ABCE

E

none

none

6

122

190

275

 

57, 92, 262

A/Alaska/10/95

A/France/75/97

S

ABCDE

BC

none

none

12

135

128, 165

275, 312

226

262

A/Sydney/5/97

A/Ireland/10586/99

S

ABDE

ABD

none

none

7

137, 142

192, 194

 

172,226

57

A/Mississippi/1/85

A/Leningrad/360/86

V

ABDE

B

B

B+

6

138

156, 159, 188

 

226

88

A/Guizhou/54/89

A/Beijing/353/89

V

ABC

A

A

A

5

135, 144, 145

159

44,

  

A/Wellington/1/2004

A/Victoria/505/2004

S

ABDE

AD

none

none

10

138, 145

189

 

219, 226, 227

94

A/Shangdong/9/93

A/Pennsylvania/9/93

S

ABCD

CD

C

C

12

135

164

53, 276

214, 219, 226, 229, 238

 

A/England/42/72

A/PortChalmers/1/73

V

BDE

B

B

B+

6

 

160, 188, 193

 

208

63

A/NewYork/55/2004

A/Anhui/1239/2005

V

ABD

B

B

B+

7

138,

156, 160, 193

 

219,

138,

A/Shanghai/16/89

A/Beijing/353/89

V

AB

A

A

A

3

135, 145

159

   
  1. 1V represents antigenic variant and S represents similar virus.
  2. 2 denote hamming distance of a pair sequences
  3. 3 Bold is the antigenic critical position.