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Table 3 Summary of EEJs detected from L2 un-mappable reads.

From: UMARS: Un-MAppable Reads Solution

EEJ category

Continuous

Discrete

CN

18,228 (95)

17,687 (1,209)

# Transcript

2,038 (14)

700 (69)

# EEJ

2,986 (14)

1,269 (83)

# EST

581,260 (4,746)

34,469 (1,642)

  1. The digits in parenthesis denote the values when no mismatch was allowed in the mapping procedure. Continuous EEJ dominated over discrete ones in terms of read copy number and EST abundance.
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BMC Bioinformatics

ISSN: 1471-2105

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