BMC Bioinformatics

Table 5 Performance Comparison for the Selected Categorical Attributes in Biological Activity Data of Glycogen Synthase Kinase-3β Inhibitors Using Two-degree Polynomial Kernel and Gaussian Kernels.

From: Leveraging domain information to restructure biological prediction

	Entropy list order				Training CV Accuracy(%)				Test Accuracy(%)
	Poly	Gausssian			Poly	Gausssian (γ)			Poly	Gausssian (γ)
		0.01	1	10		0.01	1	10		0.01	1	10
Baseline	–	–	–	–	76.23	73.10	62.74	59.42	74.26	70.69	60.58	57.44
nCIR	3	2	1	1	78.84	75.41	64.48	60.15	74.55	71.23	61.26	58.02
F06[N-O]	2	1	2	2	77.62	73.23	63.34	60.23	73.28	70.49	60.87	56.95
H-049	4	5	4	4	79.75	74.69	65.18	61.03	75.14	71.87	62.76	57.26
nN	1	6	6	7	79.24	74.87	64.77	60.49	75.23	71.04	62.38	57.15
F04[N-N]	7	3	5	6	78.32	74.14	63.14	60.63	74.16	70.02	61.79	57.69
Bioassay Protocol	8	7	3	5	79.15	75.54	65.15	62.25	76.03	72.87	63.76	59.34
nHDon	11	19	18	19	77.63	74.18	63.05	60.02	75.12	71.17	60.34	57.28
H-050	21	7	7	9	76.95	73.57	63.72	60.35	74.34	71.09	59.28	56.94
nDB	13	24	21	25	75.37	73.89	62.83	59.25	73.22	70.18	60.47	56.74
F07[C-Br]	17	12	15	16	77.25	74.58	63.04	60.42	73.96	71.65	61.07	58.15
F02[N-O]	25	16	13	15	76.14	73.87	62.95	58.72	72.87	70.66	60.84	57.35
N-075	20	17	17	21	78.06	74.92	63.74	60.87	75.64	71.29	62.88	59.04
F06[C-Br]	27	26	25	23	75.44	72.05	61.43	58.28	72.76	69.96	60.03	55.74
F02[N-N]	33	30	26	32	77.83	74.15	63.82	60.96	74.56	70.75	61.44	59.45
N-074	29	35	33	34	76.54	73.47	63.95	60.42	74.75	71.03	60.58	57.96
F03[N-N]	36	31	34	37	75.69	74.26	62.65	59.35	73.48	70.33	59.87	57.28

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