Features | Sn (%) | Sp (%) | Pr (%) | Ac (%) | NP (%) | Fm (%) | CC |
---|
sIP | 41.3 | 70.9 | 13.2 | 68.1 | 56.1 | 52.2 | 0.08 |
prev_tIP | 57.0 | 83.5 | 27.0 | 80.9 | 70.3 | 67.8 | 0.29 |
tIP | 57.4 | 83.8 | 27.5 | 81.3 | 70.6 | 68.2 | 0.30 |
sIP + R | 57.3 | 83.1 | 26.7 | 80.6 | 70.2 | 67.8 | 0.29 |
prev_tIP + R | 61.5 | 85.1 | 30.7 | 82.8 | 73.3 | 71.4 | 0.34 |
tIP + R | 61.4 | 85.2 | 30.8 | 82.9 | 73.3 | 71.4 | 0.35 |
- The non-redundant dataset with a window size=15 was encoded into the feature vectors with different interaction propensities separately or with the RNA feature (R) in combination. The prediction performance was evaluated by 5-fold cross validation. sIP: the interaction propensity of single amino acids. prev_tIP: the previous version of the interaction propensity of amino acid triplets. tIP: the modified interaction propensity of amino acid triplets. Sn: sensitivity. Sp: specificity. Pr: precision rate. Ac: accuracy. NP: net prediction. Fm: F-measure. CC: correlation coefficient.