Table 2 Results of cancer fusion gene detection simulations
From: Genotyping common and rare variation using overlapping pool sequencing
Parameter Values (Num Pools, Coverage, Error Rate) | # of Samples with Fusion | ||
|---|---|---|---|
| Â | 1 | 2 | 3 |
(10, 4 , 0.01) | 0.980 | 0.760 | 0.340 |
(10, 12 , 0.01) | 0.990 | 0.970 | 0.700 |
(10, 16, 0.01) | 1.000 | 0.980 | 0.780 |
(10, 20, 0.01) | 1.000 | 0.930 | 0.790 |
(10, 24, 0.01) | 1.000 | 0.990 | 0.810 |
(10, 28, 0.01) | 0.990 | 0.970 | 0.840 |
(4, 28, 0.01) | 0.180 | 0.030 | 0.000 |
(6, 28, 0.01) | 0.550 | 0.230 | 0.050 |
(8, 28, 0.01) | 1.000 | 0.900 | 0.410 |