From: SNP interaction detection with Random Forests in high-dimensional genetic data
 | Level of LD | MAF | Detection Definition | Raw MDA | Liaw MDA | SD MDA | Gini | LR P-value |
---|---|---|---|---|---|---|---|---|
1 | Strong | .294 | Causal SNP | 0.05 | 0.09 | 0.05 | 0.02 | 0.09 |
 |  |  | Causal Region | 0.2 | 0.19 | 0.21 | 0.1 | 0.3 |
 | Strong | .309 | Causal SNP | 0.2 | 0.17 | 0.15 | 0.16 | 0.14 |
 |  |  | Causal Region | 0.47 | 0.42 | 0.38 | 0.41 | 0.33 |
2 | Weak | .294 | Causal SNP | 0.43 | 0.34 | 0.49 | 0.52 | 0.4 |
 | Weak | .281 | Causal SNP | 0.35 | 0.25 | 0.35 | 0.42 | 0.29 |
3 | Strong | .294 | Causal SNP | 0.06 | 0.09 | 0.04 | 0.04 | 0.12 |
 |  |  | Causal Region | 0.32 | 0.27 | 0.27 | 0.14 | 0.41 |
 | Weak | .294 | Causal SNP | 0.51 | 0.45 | 0.4 | 0.62 | 0.3 |
4 | None | .294 | Causal SNP | 0.28 | 0.21 | 0.3 | 0.31 | 0.33 |
 | None | .294 | Causal SNP | 0.29 | 0.27 | 0.3 | 0.31 | 0.29 |