| Min | Median | Mean | Max |
---|
Nodes | 1 | 35 | 63.63 | 1,023 |
Edges | 3 | 110 | 324.4 | 14,251 |
N50 Size (kbp) | 14 | 212.1 | 419.2 | 3,587 |
Genome Length (Mbp) | 0.34 | 2.91 | 3.2 | 9.14 |
Restriction Sites | 6 | 334 | 491.7 | 9,668 |
- The de Bruijn graphs for 369 bacterial genomes were generated with k-mer size 100 from the known sequences from [34] (without errors and without bubble collapsing), and the N50 size was computed for each genome, treating each edge in the de Bruijn graph as a separate contig. The row “Restriction Sites” refers to the number of cuts within the genome when using the restriction enzyme BamHI.