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Table 2 Comparison of four CNV analyses on four real normal samples

From: Reconstructing DNA copy number by joint segmentation of multiple sequences

Analysis

 

NA15510

 

NA18517

 

NA18576

 

NA18980

 

Time (min.)

  

#Det.

#Ovlp.

 

#Det.

#Ovlp.

 

#Det.

#Ovlp

 

#Det.

#Ovlp

  

Analysis 1

 

170

38

 

144

34

 

160

25

 

145

22

 

1.2

Analysis 2

 

102

36

 

109

33

 

93

25

 

91

20

 

3.7

Analysis 3

 

80

38

 

82

32

 

69

25

 

56

15

 

8.5

MPCBS

 

98

34

 

88

28

 

59

18

 

68

21

 

313.9

  1. The number of CNV detected (Det.) and overlapping (Ovlp.) and the average computation time (in minutes) for each sample under the different analyses.
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BMC Bioinformatics

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