Skip to main content

Table 2 The participants that submitted models for every endpoint (original and swap) in the MAQC-II study, and the classification methods used

From: The top-scoring ‘N’ algorithm: a generalized relative expression classification method from small numbers of biomolecules

Code

Name

Classification algorithm(s) used

CAS

Chinese Academy of Sciences

Naïve Bayes, Support Vector Machine

CBC

CapitalBio Corporation, China

k-Nearest Neighbor, Support Vector Machine

Cornell

Weill Medical College of Cornell University

Support Vector Machine

FBK

Fondazione Bruno Kessler, Italy

Discriminant Analysis, Support Vector Machine

GeneGo

GeneGo, Inc.

Discriminant Analysis, Random Forest

GHI

Golden Helix, Inc.

Classification Tree

GSK

GlaxoSmithKline

Naïve Bayes

NCTR

National Center for Toxicological Research, FDA

k-Nearest Neighbor, Naïve Bayes, Support Vector Machine

NWU

Northwestern University

k-Nearest Neighbor, Classification Tree, Support Vector Machine

SAI

Systems Analytics, Inc.

Discriminant Analysis, k-Nearest Neighbor, Machine Learning, Support Vector Machine, Logistic Regression

SAS

SAS Institute, Inc.

Classification Tree, Discriminant Analysis, Logistic Regression, Partial Least Squares, Support Vector Machine

Tsinghua

Tsinghua University, China

Classification Tree, k-Nearest Neighbor, Recursive Feature Elimination, Support Vector Machine

UIUC

University of Illinois, Urbana-Champaign

Classification Tree, k-Nearest Neighbor, Naïve Bayes, Support Vector Machine

USM

University of Southern Mississippi

Artificial Neural Network, Naïve Bayes, Sequential Minimal Optimization, Support Vector Machine

ZJU

Zejiang University, China

k-Nearest Neighbor, Nearest Centroid