Table 2 ID converter tools, data sources and availability

DAVID

GenBank, RefSeq, KEGG, OMIM, UniGene

http://david.abcc.ncifcrf.gov/

Babelomics

Go, KEGG, Ensembl and others

http://babelomics.bioinfo.cipf.es/

g:Convert

GO, KEGG, Ensembl, TRANSFAC, Reactome

http://biit.cs.ut.ee/gprofiler/

HMS and IC

Ensembl, GO, KEGG and others

http://biodb.jp/

Synergizer

Ensembl, NCBI, RGD, SGD, KEGG, WormBase and EcoCyc

http://llama.mshri.on.ca/synergizer/translate/

Clone/Gene ID Converter

Ensembl, NCBI, Pubmed, UCSC, KEGG, Reactome

http://idconverter.bioinfo.cnio.es/

MADGene

GEO, UniGene, Entrez and others

http://www.madtools.org/

GATExplorer

Ensembl, Affymetrix^®;

http://bioinfow.dep.usal.es/xgate/principal.php

NetAffx^™

NCBI, GO, KEGG and others

http://www.affymetrix.com/analysis/netaffx/

PLANdbAffy

Affymetrix^®;, UCSC, NCBI

http://affymetrix2.bioinf.fbb.msu.ru/

probeMatchDB

UniGene, HomoloGene

http://brainarray.mbni.med.umich.edu/Brainarray/

Uniprot

GenBank, RefSeq, GO and others

http://www.uniprot.org/

Onto-Translate

Ensembl, GO, KEGG and others

http://vortex.cs.wayne.edu/

AliasServer

Ensembl, EMBL, NCBI, SGD and others

http://cbi.labri.fr/outils/alias/

MatchMiner

Affymetrix^®;, UCSC, UniGene, Entrez, OMIM

http://discover.nci.nih.gov/matchminer/index.jsp

GeneMerge

GO, KEGG

http://genemerge.cbcb.umd.edu/

BioMart

NCBI, GO, KEGG and others

http://www.biomart.org/

BridgeDb

Ensembl and others

http://www.bridgedb.org/

AbsIDconvert

UCSC, NCBI, Ensembl, Agilent, Affymetrix^®; and others

http://bioinformatics.louisville.edu/abid/