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Table 4 Sequences homologues to GU570202

From: Highly improved homopolymer aware nucleotide-protein alignments with 454 data

Entry ID

Identity

Positives

Coverage

Gaps

Score

ADN28513.1

576/589 (98%)

580/589 (98%)

589/648 (91%)

0

1125 bits

ADN28521.1

544/589 (92%)

565/589 (96%)

589/648 (91%)

0

1076 bits

ADM33775.1

497/590 (84%)

533/590 (90%)

590/648 (91%)

1

984 bits

ADD46842.1

355/590 (60%)

442/590 (75%)

590/648 (91%)

14

737 bits

ACR57080.1

258/521 (50%)

348/521 (67%)

521/648 (80%)

15

543 bits

AEO16615.1

249/513 (49%)

328/513 (64%)

513/648 (79%)

15

506 bits

ADN28549.1

288/595 (48%)

393/595 (66%)

595/648 (92%)

17

552 bits

  1. The table shows the BLAST statistics for some homologues to GU570202. The BLASTx program was used with default parameters against with the nucleotide GU570202 ORF1 sequence as query. The identities given are averages for the aligned region while partial alignments relevant for the alignment of a read may obtain both a lower and higher identity.