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Table 1 Largest rigid component sizes for genome-wide experiments

From: Graph rigidity reveals well-constrained regions of chromosome conformation embeddings

 

Unaugmented

Augmented

Experiment

Graph size

Rigid component

Graph size

Rigid component

GM06690

2,880

2,879

2,882

2,880

K562

2,874

2,874

2,882

2,874

Budding yeast

3,172

2,880

4,193

2,959

Fission yeast

611

590

619

606

  1. The number of vertices (graph size) in the largest connected component and the number of vertices in the largest rigid component for genome-wide chromosome conformation graphs (unaugmented and augmented) at the 98.8% interaction frequency cutoff.
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BMC Bioinformatics

ISSN: 1471-2105

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