From: dsPIG: a tool to predict imprinted genes from the deep sequencing of whole transcriptomes
SNP(rs#) | Chr | Location | Str | Posterior | GeneID | Symbol | SS | FDR | Group |
---|---|---|---|---|---|---|---|---|---|
11538691 | chr17 | 4789783 | + | 1 | 5216 | PFN1 | 9 | 0 | I |
178412 | chr7 | 73173272 | - | 1 | 3984 | LIMK1 | 8 | 0 | I |
17094371 | chr14 | 57677831 | + | 1 | 145407 | C14orf37 | 9 | 0 | I |
2596331 | chr1 | 143820905 | - | 0.999996 | 9554 | SEC22B | 7 | 0.26 | I |
8110904 | chr19 | 47723208 | + | 0.999995 | 634 | CEACAM1 | 4 | 0 | I |
11555395 | chr17 | 67629054 | + | 0.999993 | 6662 | SOX9 | 5 | 0 | I |
4015375 | chr7 | 89628110 | + | 0.99997 | 26872 | STEAP1 | 6 | 0 | I |
4015375 | chr7 | 89628110 | + | 0.99997 | 256227 | MGC87042 | 6 | 0 | I |
10208923 | chr2 | 141157767 | + | 0.9998 | 53353 | LRP1B | 5 | 0 | I |
9807047 | chr17 | 46229893 | + | 0.999751 | 731414 | LOC731414 | 7 | 0 | I |
584959 | chr3 | 61703763 | + | 0.995669 | 100128936 | RPL10AP6 | 9 | 0.052 | I |
10800864 | chr1 | 201003241 | + | 0.995398 | 10765 | KDM5B | 9 | 0.052 | I |
10306 | chr10 | 74437407 | - | 0.993645 | 5033 | P4HA1 | 4 | 0 | I |
2009646 | chr5 | 108148856 | + | 0.989758 | 2241 | FER | 6 | 0 | I |
2009646 | chr5 | 108148856 | + | 0.989758 | 643534 | LOC643534 | 6 | 0 | I |
178412 | chr7 | 73173272 | - | 1 | 3984 | LIMK1 | 11 | 0.098 | II |
11538691 | chr17 | 4789783 | + | 1 | 5216 | PFN1 | 20 | 0.023 | II |
11541557 | chr1 | 226352225 | + | 1 | 375 | ARF1 | 9 | 0 | II |
17492855 | chr2 | 158989711 | + | 0.999999 | 130940 | CCDC148 | 18 | 0.014 | II |
2352731 | chr3 | 144378737 | + | 0.999995 | 5089 | PBX2 | 10 | 0.072 | II |
1065453 | chr7 | 99755171 | - | 0.999992 | 441272 | SPDYE3 | 5 | 0 | II |
11066116 | chr12 | 110915447 | + | 0.999989 | 89894 | TMEM116 | 8 | 0 | II |
2499 | chr6 | 30021520 | - | 0.999982 | 3105 | HLA-A | 7 | 0.26 | II |
3093976 | chr6 | 31610839 | - | 0.99993 | 7919 | BAT1 | 8 | 0.12 | II |
705 | chr15 | 22770604 | + | 0.999919 | 6638 | SNRPN | 20 | 0.023 | II |
705 | chr15 | 22770604 | + | 0.999919 | 8926 | SNURF | 20 | 0.023 | II |
3132453 | chr6 | 31712022 | - | 0.999913 | 7916 | BAT2 | 4 | 0 | II |
1051470 | chr12 | 117067614 | + | 0.999874 | 5037 | PEBP1 | 14 | 0.051 | II |
1364261 | chr16 | 70597171 | - | 0.999859 | 100130263 | LOC100130263 | 8 | 0 | II |
11160608 | chr14 | 100382845 | + | 0.999796 | 100130955 | LOC100130955 | 20 | 0.023 | II |