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Figure 5 | BMC Bioinformatics

Figure 5

From: RNAmap2D – calculation, visualization and analysis of contact and distance maps for RNA and protein-RNA complex structures

Figure 5

An example RNA structure with a pseudoknot. A projection of a 3D structure of a viral RNA pseudoknot (crystal structure, PDB id 1L2X) in the simplified cartoon format (backbone as a ribbon, nucleotide residues as sticks). 5’ and 3’-terminal residues are labeled. The structure is colored as a rainbow spectrum, from 5’ (red) to 3’ (blue) termini.

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