From: Genome plasticity and systems evolution in Streptomyces
Function description | Examples of GO classes | No. families |
---|---|---|
Genetic information processing | GO:0006260 (DNA replication) | 27 |
 | GO:0006350 (transcription) | 174 |
 | GO:0006412 (translation) | 102 |
 | GO:0006310 (DNA recombination) | 14 |
 | GO:0004803 (transposase activity) | 4 |
 | GO:0015074 (DNA integration) | 2 |
Regulation | GO:0003700 (sequence-specific DNA binding transcription factor activity) | 201 |
 | GO:0016566 (specific transcriptional repressor activity) | 43 |
 | GO:0000155 (two-component sensor activity) | 36 |
 | GO:0000156 (two-component response regulator activity) | 49 |
 | GO:0016987 (sigma factor activity) | 31 |
Metabolism | GO:0005975 (carbohydrate metabolic process) | 67 |
 | GO:0009058 (biosynthetic process) | 66 |
 | GO:0009116 (nucleoside metabolic process) | 13 |
 | GO:0006520 (cellular amino acid metabolic process) | 12 |
 | GO:0006631 (fatty acid metabolic process) | 7 |
Morphogenesis | GO:0007047 (cellular cell wall organization) | 14 |
 | GO:0007059 (chromosome segregation) | 9 |
 | GO:0000902 (cell morphogenesis) | 3 |
 | GO:0000917 (barrier septum formation) | 2 |
Response to stimulus | GO:0006950 (response to stress) | 22 |
 | GO:0046677 (response to antibiotic) | 12 |
 | GO:0009432 (SOS response) | 9 |
 | GO:0006979 (response to oxidative stress) | 3 |
Transport | GO:0006811 (ion transport) | 14 |
 | GO:0015904 (tetracycline transport) | 9 |
 | GO:0015031 (protein transport) | 8 |
 | GO:0006817 (phosphate transport) | 6 |
 | GO:0006865 (amino acid transport) | 6 |
 | GO:0008643 (carbohydrate transport) | 6 |
Hydrolase | GO:0008233 (peptidase activity) | 38 |
 | GO:0016810 (hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds) | 22 |
 | GO:0004553 (hydrolase activity, hydrolyzing O-glycosyl compounds) | 19 |
 | GO:0016788 (hydrolase activity, acting on ester bonds) | 12 |
 | GO:0016820 (hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances) | 10 |
 | GO:0016799 (hydrolase activity, hydrolyzing N-glycosyl compounds) | 7 |
 | GO:0030245 (cellulose catabolic process) | 3 |
 | GO:0004568 (chitinase activity) | 2 |
Ion binding | GO:0008270 (zinc ion binding) | 52 |
 | GO:0051536 (iron-sulfur cluster binding) | 45 |
 | GO:0000287 (magnesium ion binding) | 29 |
 | GO:0005506 (iron ion binding) | 26 |