Figure 2

Overview of Artemis genome browser. Description of the tracks used for data analysis in Artemis genome browser. (a) reads aligned to the genome (b) expression portrayed as coverage graph (c) reading frames 5'-3', (d) forward strand of the genome, (e) reverse strand of the genome, (f) reading frames 3'-5', (g) amino acid sequences corresponding to the 6 reading frames, (h) expressed intergenic region, (i) computationally predicted regulatory signal (promoter/rho-independent terminator), (j) annotated gene (white), based on M. haemolytica Genbank accession # AASA00000000, (k) ORFs (blue) of a specified minimum length, predicted by Artemis between two consecutive stop codons, (l) stop codons in all six reading frames (black) and, (m) start codons in all six reading frames (pink).