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Table 3 Comparison OMIM with other competing algorithms on PPI dataset

From: An overlapping module identification method in protein-protein interaction networks

Algorithm

Module number

Module size

Discard rate

(%)

GO(-log P-value)

    

BP

MF

CC

OMIM

115

25.81

44.26

7.27

7.69

7.44

Newman

115

24.18

44.26

7.18

7.39

7.22

MCL

319

7.40

52.68

7.17

6.72

7.16

CPM

66

10.96

85.51

8.39

7.60

8.53

  1. Module number: the number of modules obtained by each algorithm. Module size: the average size of modules in each algorithm. GO: the average -log P-values of all modules for biological process (BP), molecular functions (MF) and cellular component (CC).
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BMC Bioinformatics

ISSN: 1471-2105

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