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Table 2 RefSeq vs either YPS128 Y55: DELETIONS

From: Mobilomics in Saccharomyces cerevisiaestrains

RefSeq vs Y55 strain

pDEL vs not Ty-annotated in RefSeq

pDEL vs Ty-annotations in RefSeq

Ty-c

ltr-c

in-between

Ty

33

ltr

58

0

2

2

Ty1

21

Ty1ltr

31

   

Ty2

9

Ty2ltr

7

   

Ty3

1

Ty3ltr

13

   

Ty4

2

Ty4ltr

6

   

Ty5

 

Ty5ltr

1

RefSeq vs YPS128 strain

pDEL vs not Ty-annotated in RefSeq

pDEL vs Ty-annotations in RefSeq

Ty-c

ltr-c

in-between

Ty

29

ltr

55

0

2

0

Ty1

20

Ty1ltr

28

   

Ty2

7

Ty2ltr

6

   

Ty3

1

Ty3ltr

15

   

Ty4

1

Ty4ltr

6

   

Ty5

 

Ty5ltr

 
  1. Putative deleted regions (pDEL) vs annotated Ty and solo-LTR and non-annotated regions in RefSeq. Labels “Ty-c” and “LTR-c” refer to putative deleted regions whose lengths are compatible with Ty or solo-LTR lengths. Label “in-between” refers to region lengths which are intermediate between Ty-c and solo-LTR-c.