From: Iterative rank-order normalization of gene expression microarray data
 |  | HG-U95a | HG-U133a | ||||||
---|---|---|---|---|---|---|---|---|---|
Metric # | Metric Name | MAS5-apt | IRON | RMA-apt | dChip | MAS5-apt | IRON | RMA-apt | dChip |
1 | Median SD | 0.59 | 0.20 | 0.11 | 0.32 | 0.29 | 0.14 | 0.07 | 0.20 |
2 | null log-fc IQR | 0.84 | 0.33 | 0.19 | 0.38 | 0.47 | 0.24 | 0.13 | 0.26 |
3 | null log-fc 99.9% | 4.46 | 1.59 | 0.57 | 10.83 | 4.01 | 1.42 | 0.40 | 9.61 |
4 | Signal detect R2 | 0.86 | 0.82 | 0.80 | 0.61 | 0.91 | 0.90 | 0.90 | 0.65 |
5 | Signal detect slope | 0.71 | 0.67 | 0.63 | 0.91 | 0.77 | 0.69 | 0.68 | 0.98 |
6 | low.slope | 0.69 | 0.44 | 0.35 | 1.17 | 0.65 | 0.41 | 0.31 | 1.29 |
7 | med.slope | 0.81 | 0.82 | 0.76 | 0.87 | 0.71 | 0.68 | 0.71 | 0.75 |
8 | high.slope | 0.45 | 0.50 | 0.47 | 0.34 | 0.77 | 0.83 | 0.80 | 0.69 |
9 | Obs-intended-fc slope | 0.69 | 0.66 | 0.61 | 0.87 | 0.77 | 0.69 | 0.68 | 0.99 |
10 | Obs-(low)int-fc slope | 0.65 | 0.44 | 0.36 | 1.68 | 0.64 | 0.40 | 0.31 | 1.17 |
11 | low AUC | 0.00 | 0.03 | 0.40 | 0.04 | 0.00 | 0.08 | 0.51 | 0.08 |
12 | med AUC | 0.00 | 0.03 | 0.87 | 0.00 | 0.00 | 0.10 | 0.88 | 0.00 |
13 | high AUC | 0.00 | 0.00 | 0.46 | 0.00 | 0.00 | 0.13 | 0.93 | 0.00 |
14 | weighted avg AUC | 0.00 | 0.03 | 0.52 | 0.03 | 0.00 | 0.08 | 0.60 | 0.06 |