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Table 4 REML output for the repeat element dataset

From: Empirical assessment of competitive hybridization and noise in ultra high density canine tiling arrays

Fixed term

Fstatistic

P-value

Effect

Standard error

Probe GC

121.40

<0.001

0.051

0.005

Free energy

8.56

0.004

0.109

0.038

PolyA

0.75

0.389

0.022

0.025

PolyC

19.64

<0.001

0.235

0.053

PolyG

5.74

0.017

0.045

0.019

PolyT

2.89

0.121

-0.021

0.028

Offset

4.51

0.034

 

0.059a

  6 bp

  

0

 

  26 bp

  

0.124

 

loge Background

0.58

0.446

-0.022

0.028

loge Repeat length

0.11

0.736

0.013

0.038

  1. a Standard error of the difference between the effect of 6 bp or 26 bp offset.