Table 3 The 15 KEGG Yeast Pathways used in the experiments
From: GRank: a middleware search engine for ranking genes by relevance to given genes
Class | Yeast | ||
|---|---|---|---|
Pathway | Name | # of genes | |
Carbohydrate Metabolism | sce00562 | Inositol phosphate metabolism | 15 |
Energy Metabolism | sce00920 | Sulfur metabolism | 15 |
Lipid Metabolism | sce00600 | Sphingolipid metabolism | 13 |
Amino Acid Metabolism | sce00410 | beta-Alanine metabolism | 12 |
Glycan Biosynthesis and Metabolism | sce00514 | Saccharomyces cerevisiae | 13 |
Metabolism of Cofactors and Vitamins | sce00670 | One carbon pool by folate | 15 |
Biosynthesis of Other Secondary Metabolites | sce00903 | Limonene and pinene degradation | 20 |
Transcription | sce03022 | Basal transcription factors | 32 |
Folding, Sorting and Degradation | sce04130 | SNARE interactions in vesicular transport | 23 |
Replication and Repair | sce03450 | Non-homologous end-joining | 10 |
Replication and Repair | sce04070 | Phosphatidylinositol signaling system | 15 |
Fatty acid metabolism | sce04140 | Regulation of autophagy | 17 |
Cellular Processes | sce04111 | Saccharomyces cerevisiae | 25 |
Signal Transduction | sce04011 | MAPK signaling pathway | 57 |
Lipid Metabolism | sce03010 | Ribosome | 12 |
Total number of genes | 294 | ||